servers:sds-inventory
Table of Contents
Inventory of SD17D003
Last updated 21.03.2024
Top level
Items: 84823338
Total disk usage: 467.9 TiB
120.0 TiB [##########] /verified
49.8 TiB [#### ] /bw16f004_backup
26.2 TiB [## ] /SingleNucDB
24.2 TiB [## ] /Evgeny
23.8 TiB [# ] /Pascal
. 22.1 TiB [# ] /Florent
20.6 TiB [# ] /NextSeq
. 19.4 TiB [# ] /Kevin
16.9 TiB [# ] /pipeliner
13.3 TiB [# ] /Ioannis
13.1 TiB [# ] /DanielSC
. 13.0 TiB [# ] /Philipp
11.3 TiB [ ] /scATAC
11.1 TiB [ ] /Xuefei
10.9 TiB [ ] /Tetsuya
10.6 TiB [ ] /VerteBrain
10.2 TiB [ ] /snMultiome
9.1 TiB [ ] /Nils
8.2 TiB [ ] /Margarida
4.0 TiB [ ] /Bassi
. 3.9 TiB [ ] /Francisca
3.2 TiB [ ] /backup_Zhongyi_Wang
2.9 TiB [ ] /backup_fmurat
2.7 TiB [ ] /share_backup
2.7 TiB [ ] /CellRangerRef
2.3 TiB [ ] /Francesco
. 2.1 TiB [ ] /Marta
. 2.0 TiB [ ] /Kerry
1.5 TiB [ ] /ksserver_backup
1.4 TiB [ ] /backup_Maria_Warnefors
1.4 TiB [ ] /SingleNucDB_old
1.2 TiB [ ] /sd17a005
1.0 TiB [ ] /backup_master_students
865.2 GiB [ ] /Alumni
360.3 GiB [ ] /Kristy
235.7 GiB [ ] /Shark_Cerebellum
150.9 GiB [ ] /Noe
140.5 GiB [ ] /elab_backup
105.4 GiB [ ] /Leti
67.9 GiB [ ] /server_conf_backup
45.4 GiB [ ] /RPF_DB
38.0 GiB [ ] /Heidelberg_Lab_backup
4.8 GiB [ ] /markerdb_backup
2.7 GiB [ ] /Data_Exchange
2.0 GiB [ ] /_old_Heidelberg_Lab_backup
1.0 GiB [ ] /hkdb_backup
21.7 MiB [ ] /ksweb_backup
56.0 KiB [ ] /.TemporaryItems
48.0 KiB [ ] /.no
e 16.0 KiB [ ] /test
! 16.0 KiB [ ] /.ptrash
! 16.0 KiB [ ] /.afm
16.0 KiB [ ] .DS_Store
e 4.0 KiB [ ] /cistromes
e 4.0 KiB [ ] /Vertebrain_share
! 4.0 KiB [ ] /Lep_oculatus_mito_STAR
Attention needed
/verified
As far as I can tell, this is a backup of data produced in Lausanne.
/sequencing_data
This includes ~10 TB in a folder called /sequencing_data, which seems to contain raw sequencing data.
Items: 47525
8.7 TiB [##########] /HISEQLIST-ARCHIVE
643.7 GiB [ ] /GALIST-ARCHIVE
339.4 GiB [ ] /0_HenrikKaessman_Projects
284.9 GiB [ ] /hiseq_batch2
5.2 GiB [ ] /resync
6.0 MiB [ ] HISEQLIST-ARCHIVE.sha
5.4 MiB [ ] HISEQLIST-ARCHIVE.b64
1.4 MiB [ ] 0_HenrikKaessman_Projects.sha
1.3 MiB [ ] 0_HenrikKaessman_Projects.b64
136.0 KiB [ ] hiseq_batch2.sha
120.0 KiB [ ] hiseq_batch2.b64
64.0 KiB [ ] GALIST-ARCHIVE.sha
56.0 KiB [ ] GALIST-ARCHIVE.b64
20.0 KiB [ ] echidna.sha
8.0 KiB [ ] .DS_Store
4.0 KiB [ ] ._.DS_Store
/user_data
The remaining ~110 TB is in a folder called /user_data, containing data of previous lab members.
Items: 3060813
29.6 TiB [##########] /mcardoso
19.6 TiB [###### ] /rmarin_full
16.0 TiB [##### ] /rmarin
13.7 TiB [#### ] /anecsule
6.1 TiB [## ] /abilican
4.0 TiB [# ] /fgruhl
3.4 TiB [# ] /fcarelli
3.3 TiB [# ] /msoumill
3.0 TiB [# ] /dcortezq
2.7 TiB [ ] /pjulien1
2.7 TiB [ ] /kguschan
2.6 TiB [ ] /dbrawand
1.8 TiB [ ] /ifinci
761.3 GiB [ ] /vlink
496.4 GiB [ ] /jmeunie2
326.9 GiB [ ] /mwarnefo
136.1 GiB [ ] /nvincken
68.4 GiB [ ] /lpotrzeb
60.8 GiB [ ] /flemoine
22.4 GiB [ ] /jgervaix
415.4 MiB [ ] /common
185.8 MiB [ ] /lsanchez
174.8 MiB [ ] rmarin_full.sha.urz
92.4 MiB [ ] pjulien1.sha.urz
68.1 MiB [ ] rmarin.sha.urz
34.3 MiB [ ] anecsule.sha.urz
32.6 MiB [ ] lpotrzeb.sha.urz
26.4 MiB [ ] /hkaessma
25.5 MiB [ ] msoumill.sha.urz
18.7 MiB [ ] dbrawand.sha.urz
17.3 MiB [ ] jgervaix.sha.urz
13.9 MiB [ ] ifinci.sha.urz
10.0 MiB [ ] mcardoso.sha.urz
7.8 MiB [ ] jmeunie2.sha.urz
5.7 MiB [ ] fcarelli.sha.urz
3.7 MiB [ ] fgruhl.sha.urz
3.4 MiB [ ] nvincken.sha.urz
2.3 MiB [ ] vlink.sha.urz
2.2 MiB [ ] abilican.sha.urz
1.9 MiB [ ] dcortezq.sha.urz
460.0 KiB [ ] kguschan.sha.urz
84.0 KiB [ ] lsanchez.sha.urz
56.0 KiB [ ] common.sha.urz
36.0 KiB [ ] mwarnefo.sha.urz
4.0 KiB [ ] hkaessma.sha.urz
4.0 KiB [ ] flemoine.sha.urz
Suggestion
We should consider moving this to an archiving service, if nobody is actively using this data. The heiARCHIVE service supports the storage of alumni data, as well as per experiment data.
/bw16f004_backup
This folder is a backup of the shared bw16f004 workspace from the now defunct MLS&WISO Cluster (predecessor of Helix). Most of this data is duplicated on the SDS already, e.g. NextSeq raw data and SingleNucDB.
Items: 4726393
11.0 TiB [##########] /SingleNucDB
9.3 TiB [######## ] /Chromium
8.8 TiB [####### ] /Margarida
7.0 TiB [###### ] /scATAC
5.9 TiB [##### ] /Evgeny
2.7 TiB [## ] /Kevin
2.5 TiB [## ] /backup_Zhongyi_Wang
946.4 GiB [ ] /CellRangerRef
892.9 GiB [ ] /Anolis_project
160.9 GiB [ ] /TestisAnnotations
104.9 GiB [ ] /Marmoset_20180716
85.6 GiB [ ] /Protocols
69.7 GiB [ ] /Florent
67.0 GiB [ ] /Francesco
58.2 GiB [ ] /Juan
56.3 GiB [ ] /Ioannis
34.9 GiB [ ] /Kristy
33.1 GiB [ ] /Robert
23.8 GiB [ ] /Florent_results
3.5 GiB [ ] /Genomes
1.2 GiB [ ] /bin
586.6 MiB [ ] /src
47.3 MiB [ ] /ProteomicsFalk
5.4 MiB [ ] /course
68.0 KiB [ ] /backup_Maria_Warnefors
16.0 KiB [ ] /Bassi
8.0 KiB [ ] .DS_Store
e 4.0 KiB [ ] /Tetsuya
4.0 KiB [ ] ._CCFJ9ANXX_FL181pool1_18s003288-1-1_Ibberson_lane15250sTS_sequence.txt.gz
4.0 KiB [ ] ._.DS_Store
Suggestion
We should integrate this into the existing data of the SDS to save up to 20 TB.
/opt/bitnami/dokuwiki/data/pages/servers/sds-inventory.txt · Last modified: 2024/03/21 12:42 by ntrost